Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919007.1_cds_XP_016468294.1_60949
CDS Infomation

[gene=LOC107790848] [db_xref=GeneID:107790848] [protein=probable trehalase] [protein_id=XP_016468294.1] [location=join(21670..22253,22964..23083,23572..23687,23855..23955,24055..24164,24264..24336,24417..24584,24677..24764,25190..25289,25387..25600,26018..26104)] [gbkey=CDS]
Sequence

ATGGAAAACCCCACAATTACTGTGATTTTTACTTTGTTCATATCATTAACAGCCATGAAT
ATGACCAAAGCTGAAAGATGTACATCCGTTGATAAATCCCATGTAATTCCTACAACCCCT
TTAGTTATTTTTCTTGAAAAAGTCCAAGAAGCTGCTCTTCAATCCTATGGACATAAAGGG
TTTGATCCCAAACTGTATGTTGATATGTCACTCAAACACAATCTTTCATTAACAGTTGAA
GCTTTTAATAAACTTTCAAGATCTTTGAATGGTTCAATATCAGCACATGATTTGGATGTG
TTTATTGGAAAATATTTGGGTGTTGTAGATGAGGATTTGGTTTATGTTGAGCCTGTAGAT
TATGTGGCTGAGCCTGAAGGTTTTTTGCCAAAAGTGAAGAATTCTGAGGTGAGGACTTGG
GCATTAGAGGTGCATTCACTTTGGAAGAATTTAAGTAGAAAAGTTTCTGATAAAGTATTG
GAAAAACCAGAGTTTTATACTTTGCTTCCATTGAAAAATCCAGTTATTATACCAGGATCA
CGTTTCAGAGAAGTTTATTATTGGGATTCTTATTGGGTAATAAGGGGTTTGTTAGCAAGC
AAGATGTATGAAACCGCAAAAGGGATAGTGACTAATCTGTTTTCTCTGATAGATCAATTT
GGTTATGTTCTTAATGGTTCAAGAGCATACTACAGTAACAGAAGTCAGCCTCCTGTCCTG
GCTGCGATGATTGTTGAAATATACAATCGAACAGGTGATTTAGATTTGGTTAAAGGATCC
CTTCCTGCTTTGCTCAAGGAGTATCACTTTTGGAATTCAGGAGTACATAAAGTGACTATT
CAAGATGCTCAGGGATCAAATCACAGCTTGAGTCGGTACTATGCTATGTGGAATAAGCCC
CGTCCAGAATCTTCAACTATTGACGGAGAAACAGCTTCCAAACTCCCAAATATTTGTGGA
AAAAAACAATTATACCGTGATCTTGCCTCAGCTGCTGAAAGTGGGTGGGATTTTAGTTCT
AGATGGATGAGGAACCAATCTGATCTCACAACAACTAGTACAACGTCAATTTTACCAGTT
GATTTGAATGCATTCCTTCTGAAGATGGAACTTGACATAGCCTTTCTAGCAAATCTCGTC
GGAGAAAGTAGCATCGTTGCACATTTTACTGAAGCTTCTCAGAATAGACAAAAAGCCATG
AACTGTATATTATGGAACACAGAGATGGGACAATGGCTTGATTACTGGCTCGGTAATAGC
AACACATCCGAGGATATTTATAAATGGGAAGATTTACACCAGAACAAGAAGTCATTTGCT
TCTAACTTTGTTCCATTGTGGGCTGAATTACTTAATTCAGACGATATCACAACTCAAAAA
GTTGTTCAAAGTCTCAAGAGCTCGGGCTTGATTCAACCTGCAGGGATTGCAATGACCTTG
TCTAATACTGGACAGCAATGGGATTTTCCGAATGGTTGGCCTCCTCTTCAACACATAATC
ATTGAAGGTCTCTCAAGGTCCGGACTAGAAGAGGCAAGAGCCTTAGCTGAAGACATTGCT
GTGCGATGGATAAGAACGAACTATGTGGCTTACAAGAAAACCGGCGCAATGCATGAAAAA
TATGATGTCACAAAATGTGGAGCATATGGAGGCGGTGGTGAATATGTACCCCAAACGGGA
TTTGGATGGGCGAATGGTGTTGTACTGGCGCTTTTGGAGGAATTTGGCTGGCCTGAAGAC
TTGAAGATTGACTGCTACTAA

Peptide Sequence

PEP ID

XP_016468294.1
PEP Infomation

PREDICTED: probable trehalase [Nicotiana tabacum]
Sequence

MENPTITVIFTLFISLTAMNMTKAERCTSVDKSHVIPTTPLVIFLEKVQEAALQSYGHKG
FDPKLYVDMSLKHNLSLTVEAFNKLSRSLNGSISAHDLDVFIGKYLGVVDEDLVYVEPVD
YVAEPEGFLPKVKNSEVRTWALEVHSLWKNLSRKVSDKVLEKPEFYTLLPLKNPVIIPGS
RFREVYYWDSYWVIRGLLASKMYETAKGIVTNLFSLIDQFGYVLNGSRAYYSNRSQPPVL
AAMIVEIYNRTGDLDLVKGSLPALLKEYHFWNSGVHKVTIQDAQGSNHSLSRYYAMWNKP
RPESSTIDGETASKLPNICGKKQLYRDLASAAESGWDFSSRWMRNQSDLTTTSTTSILPV
DLNAFLLKMELDIAFLANLVGESSIVAHFTEASQNRQKAMNCILWNTEMGQWLDYWLGNS
NTSEDIYKWEDLHQNKKSFASNFVPLWAELLNSDDITTQKVVQSLKSSGLIQPAGIAMTL
SNTGQQWDFPNGWPPLQHIIIEGLSRSGLEEARALAEDIAVRWIRTNYVAYKKTGAMHEK
YDVTKCGAYGGGGEYVPQTGFGWANGVVLALLEEFGWPEDLKIDCY

Transcript Sequence

Gene sequence data has not been registered.